Creating Metabolite Pilot Processing Parameters for Small Molecule Metabolism

In this video you will learn how to setup a typical small molecule processing parameters set. Topics covered include: selecting a biotransformation set and cleavage metabolites, choosing targeted and untargeted peak finding strategies for both TOF MS and MSMS SWATH or IDA data, and adjusting thresholds for successful peak finding. Creating a list of characteristic product ions, neutral losses and isotope pattern for efficient metabolite finding is also covered.