Can the SCIEX MS Data Converter Process Multiple Files Under the Same File Name?

For research use only. Not for use in diagnostic procedures.

Answer

The SCIEX MS Data Converter can only convert one data file (in the .wiff file format) to a unique mzML file. On the other hand, the ProteoWizard utility MSConvert works to convert one wiff file with multiple samples to one mzML .

ProteoWizard software can be downloaded here: https://proteowizard.sourceforge.io/

The SCIEX MS Data Converter can only convert one data file (in the .wiff file format) to a unique mzML file.

The SCIEX MS Data Converter can be downloaded from the Software Downloads page. Navigate to Additional Downloads": and select "Converters" and MS Data Converter 1.3.1.